Gene sequences

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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015822442.1_cds_XP_016501118.1_14884
CDS Infomation	[gene=LOC107819519] [db_xref=GeneID:107819519] [protein=probable polygalacturonase At1g80170] [protein_id=XP_016501118.1] [location=complement(join(180521..180823,180948..181064,181369..181477,181650..181731,182144..182351,182437..182457,182567..182737,182962..183090,183398..183688))] [gbkey=CDS]
Sequence	ATGATCTCCCTTGATTTATGTGAATCTAGAAATACAGAAGAAATACCAGAAGAAATCATG GCTAAGATACTCTTCTTGTTTTTTGTTTTGCTAACGGTGACTCATGGAATTGCATTAATC AATTTGTCAGATGAAGTCATCCTGTCAGAGCTTGAGGATTTGGATGCAGAAGAAGGTGAT GAAGCAGAGTTTTTTGACCTCCCCAAATGGGAAACTCATCGTGGAAACAAGATTCTTGTA AATGTGGATAGCTTTGGAGCAGTTGGTGACGGGGCTTCAGATGACACCAAGGCTTTTGTT GATGCGTGGAAACAAGCTTGTTCAACTCCAAAATCAGTCCTCTTGGTCCCTGCAGGACGC TTTTATCTAGTAAATCCAACAAGGTTCCGAGGGCCTTGTGCAGGCAGATTGAGAGTCCAG ATTGAAGGAACTATAATAGCACCGGACGAGCCTAAAAACTGGGACCCAAAGAATCCACGA ATTTGGCTTGGCTTCTTTAACTTGACTGGAGCTCTGTTCCAAGGAGGAGGAGTTATTGAT GGATCAGGCAGCAAATGGTGGGCAGCTTCATGCAAGAAGAACAAGACTAATCCTTGCAAA GCAGCACCAACTGCATTAACTATATATGCGAGCTCAGGTATAAAGGTGAAGGGCCTAACA ATCCAAAATGGCCAACAGATGAACTTTGCCATTTCTCGATCAGACTCTATACGAATAACT GGTGTTAAGGTTTCTGCTCCTGAAGACAGTCCTAATACGGATGGAATCCATATAACTGAA TCAACAAATGTTGTACTCCAGAATTCCAGAATTGGAACAGGTGATGATTGTGTCTCAATT GTCAATGCTAGTTCCAATATCAAGATGAAGGGAATTTACTGTGGACCTGGCCACGGAATC AGCATTGGGAGCCTTGGTAAGGACAACTCTGTTGGTATAGTAACTCAGGTTGTACTTGAT AATGCATTTCTCAGAGGTACCACAAATGGTCTGCGGATCAAGACATGGCAGGGTGGAGCA GGTTATGTCCGTGCAGTGCGCTTCCAAAATGTGAGGATGCAAGATGTTTCCAATCCTATC ATCATTGACCAATTCTATTGCGACTCACCAAAGTCGTGCCAGAATCAGACATCTGCAGTT GAGATAAGTGAGATAGTTTACCGGAATGTTAGTGGTACTTCAAAGAGCCAAAAGGCAATC AAATTTGCATGTAGTGACAACGTGCCCTGCAGCCACATTGTTCTGAATAACATTAACTTA GAGACCAGAGATGGTACTGCTGAGGTCTACTGCAACTCTGCCACAGGGATTGGTTATGGT TATATTCATCCATCGGCGGAGTGCCTGAACTCATCTGACAAGAAAATTGAGAAAATGGAG GCCATGCTTGACGAATCAAAGGAAGAATACCTGATTCATACTGAGCTATGA

Peptide Sequence

PEP ID	XP_016501118.1
PEP Infomation	PREDICTED: probable polygalacturonase At1g80170 [Nicotiana tabacum]
Sequence	MISLDLCESRNTEEIPEEIMAKILFLFFVLLTVTHGIALINLSDEVILSELEDLDAEEGD EAEFFDLPKWETHRGNKILVNVDSFGAVGDGASDDTKAFVDAWKQACSTPKSVLLVPAGR FYLVNPTRFRGPCAGRLRVQIEGTIIAPDEPKNWDPKNPRIWLGFFNLTGALFQGGGVID GSGSKWWAASCKKNKTNPCKAAPTALTIYASSGIKVKGLTIQNGQQMNFAISRSDSIRIT GVKVSAPEDSPNTDGIHITESTNVVLQNSRIGTGDDCVSIVNASSNIKMKGIYCGPGHGI SIGSLGKDNSVGIVTQVVLDNAFLRGTTNGLRIKTWQGGAGYVRAVRFQNVRMQDVSNPI IIDQFYCDSPKSCQNQTSAVEISEIVYRNVSGTSKSQKAIKFACSDNVPCSHIVLNNINL ETRDGTAEVYCNSATGIGYGYIHPSAECLNSSDKKIEKMEAMLDESKEEYLIHTEL

Transcript Sequence

Gene sequence data has not been registered.